This paper is about the incremental computation of control sequences for discrete event systems in uncertain environments where uncontrollable events may occur. Timed Petri nets are used for this purpose. The aim is to drive the marking of the net from an initial value to a reference one, in minimal or near-minimal time, by avoiding forbidden markings, deadlocks, and dead branches. The approach is similar to model predictive control with a finite set of control actions. At each step only a small area of the reachability graph is explored: this leads to a reasonable computational complexity. The robustness of the resulting trajectory is also evaluated according to a risk probability. A sufficient condition is provided to compute robust trajectories. The proposed results are applicable to a large class of discrete event systems, in particular in the domains of flexible manufacturing. However, they are also applicable to other domains as communication, computer science, transportation, an... [more]

The radical copolymerization kinetics of acrylamide (AM) and the water-soluble monomer sodium 4-hydroxy-4-methyl-2-methylene butanoate (SHMeMB), formed by saponification of the bio-sourced monomer γ-methyl-α-methylene-γ-butyrolactone (MeMBL), are investigated to explain the previously reported slow rates of reaction during synthesis of superabsorbent hydrogels. Limiting conversions were observed to decrease with increased temperature during SHMeMB homopolymerization, suggesting that polymerization rate is limited by depropagation. Comonomer composition drift also increased with temperature, with more AM incorporated into the copolymer due to SHMeMB depropagation. Using previous estimates for the SHMeMB propagation rate coefficient, the conversion profiles were used to estimate rate coefficients for depropagation and termination (kt). The estimate for kt,SHMeMB was found to be of the same order of magnitude as that recently reported for sodium methacrylate, with the averaged copolymeriz... [more]

With our growing understanding of the impact of microbial communities, understanding how such communities function has become a priority. The influence of microbial communities is widespread. Human-associated microbiota impacts health, environmental microbes determine ecosystem sustainability, and microbe-driven industrial processes are expanding. This broad range of applications has led to a wide range of approaches to analyze and describe microbial communities. In particular, theoretical work based on mathematical modeling has been a steady source of inspiration for explaining and predicting microbial community processes. Here, we survey some of the modeling approaches used in different contexts. We promote classifying different approaches using a unified platform, and encourage cataloging the findings in a database. We believe that the synergy emerging from a coherent collection facilitates a better understanding of important processes that determine microbial community functions. W... [more]

The partition coefficients, Kmim, of N-methylimidazole (mim) in two-component systems composed of ionic liquid (IL) and a series of organic solvents immiscible with ILs (butyl acetate, ethyl acetate, tert-butyl methyl ether, diethyl ether and cyclohexane) were determined by a shake-flask method. The influence of different factors such as temperature, solvent polarity, mim concentration, and water content on Kmim by using 1-butyl-3-methylimidazolium chloride {[C₄C₁im]Cl} as a model compound was comprehensively studied. The calculated thermodynamic functions of transfer (∆trG⁰, ∆trH⁰, ∆trS⁰) showed that the mim migration (IL→organic phase) is a thermodynamically unfavorable and enthalpy-determined process in the temperature range of 298.15 to 328.15K; however, the results suggested that mim partition toward the organic phase can be enhanced by the rational manipulation of the extraction conditions. Experiments conducted with other 1-alkyl-3-methylimidazolim chlorides (CnC₁im]Cl (n = 6, 8... [more]

A phenomenological model was developed to describe the dynamic evolution of the batch suspension polymerization of methyl methacrylate in terms of reactor temperature, pressure, concentrations and molecular properties of the final polymer. Then, the phenomenological model was used as a process constraint in dynamic data reconciliation procedures, which allowed for the successful monitoring of reaction variables in real-time and on-line. The obtained results indicate that heat transfer coefficients change significantly during the reaction time and from batch to batch, exerting a tremendous impact on the process operation. Obtained results also indicate that it can be difficult to attain thermodynamic equilibrium conditions in this system, because of the continuous condensation of evaporated monomer and the large mass transfer resistance offered by the viscous suspended droplets.

IL-6 signaling plays an important role in inflammatory processes in the body. While a number of models for IL-6 signaling are available, the parameters associated with these models vary from case to case as they are non-trivial to determine. In this study, optimal experimental design is utilized to reduce the parameter uncertainty of an IL-6 signaling model consisting of ordinary differential equations, thereby increasing the accuracy of the estimated parameter values and, potentially, the model itself. The D-optimality criterion, operating on the Fisher information matrix and, separately, on a sensitivity matrix computed from the Morris method, was used as the objective function for the optimal experimental design problem. Optimal input functions for model parameter estimation were identified by solving the optimal experimental design problem, and the resulting input functions were shown to significantly decrease parameter uncertainty in simulated experiments. Interestingly, the deter... [more]

Water-soluble metallocene and organotin-containing polyethers were synthesized employing interfacial polycondensation. The reaction involved various chain lengths of poly(ethylene glycol), and produced water-soluble polymers in decent yield. Commercially available reactants were used to allow for easy scale up. The polymers exhibited a decent ability to inhibit a range of cancer cell lines, including two pancreatic cancer cell lines. This approach should allow the synthesis of a wide variety of other water-soluble polymers.

Recovering valuable compounds from waste streams of bio-based production processes is in line with the circular economy paradigm, and is achievable by implementing “simple-to-use” and well-established process separation technologies. Such solutions are acceptable from industrial, economic and environmental points of view, implying relatively easy future implementation on pilot- and full-scale levels in the bio-based industry. Reviewing such technologies is therefore the focus here. Considerations about technology readiness level (TRL) and Net Present Value (NPV) are included in the review, since TRL and NPV contribute significantly to the techno-economic evaluation of future and promising process solutions. Based on the present review, a qualitative guideline for resource recovery from bio-based production processes is proposed. Finally, future approaches and perspectives toward identification and implementation of suitable resource recovery units for bio-based production processes are... [more]

Energy optimization in buildings by controlling the Heating Ventilation and Air Conditioning (HVAC) system is being researched extensively. In this paper, a model-free actor-critic Reinforcement Learning (RL) controller is designed using a variant of artificial recurrent neural networks called Long-Short-Term Memory (LSTM) networks. Optimization of thermal comfort alongside energy consumption is the goal in tuning this RL controller. The test platform, our office space, is designed using SketchUp. Using OpenStudio, the HVAC system is installed in the office. The control schemes (ideal thermal comfort, a traditional control and the RL control) are implemented in MATLAB. Using the Building Control Virtual Test Bed (BCVTB), the control of the thermostat schedule during each sample time is implemented for the office in EnergyPlus alongside local weather data. Results from training and validation indicate that the RL controller improves thermal comfort by an average of 15% and energy effici... [more]

Alzheimer’s disease (AD) is a major public health threat; however, despite decades of research, the disease mechanisms are not completely understood, and there is a significant dearth of predictive biomarkers. The availability of systems biology approaches has opened new avenues for understanding disease mechanisms at a pathway level. However, to the best of our knowledge, no prior study has characterized the nature of pathway crosstalks in AD, or examined their utility as biomarkers for diagnosis or prognosis. In this paper, we build the first computational crosstalk model of AD incorporating genetics, antecedent knowledge, and biomarkers from a national study to create a generic pathway crosstalk reference map and to characterize the nature of genetic and protein pathway crosstalks in mild cognitive impairment (MCI) subjects. We perform initial studies of the utility of incorporating these crosstalks as biomarkers for assessing the risk of MCI progression to AD dementia. Our analysis... [more]

Over the years, there has been a consistent increase in the amount of data collected by systems and processes in many different industries and fields. Simultaneously, there is a growing push towards revealing and exploiting of the information contained therein. The chemical processes industry is one such field, with high volume and high-dimensional time series data. In this paper, we present a unified overview of the application of recently-developed data visualization concepts to fault detection in the chemical industry. We consider three common types of processes and compare visualization-based fault detection performance to methods used currently.

Plasticizers are commonly added to poly(vinyl chloride) (PVC) and other brittle polymers to improve their flexibility and processing properties. Phthalate plasticizers such as di(2-ethylhexyl phthalate) (DEHP) are the most common PVC plasticizers and have recently been linked to a wide range of developmental and reproductive toxicities in mammals. Our group has developed several replacement compounds that have good biodegradation kinetics, low toxicity profiles, and comparable plasticizer properties to DEHP. Knowledge of the rheology of PVC⁻plasticizer blends at elevated temperatures is crucial for understanding and predicting the behavior of the compounds during processing. In this work, the time⁻temperature profiles of PVC blended with our replacement green plasticizers—succinates, maleates, and dibenzoates, of varying alkyl chain length—are compared to blends prepared with DEHP and a commercially available non-phthalate plasticizer, di(isononyl cyclohexane-1,2-dicarboxylate) (Hexamo... [more]

The effectiveness of model-based multivariable controllers depends on the quality of the model used. In addition to satisfying standard accuracy requirements for model structure and parameter estimates, a model to be used in a controller must also satisfy control-relevant requirements, such as integral controllability. Design of experiments (DOE), which produce data from which control-relevant models can be accurately estimated, may differ from standard DOE. The purpose of this paper is to emphasize this basic principle and to summarize some fundamental results obtained in recent years for DOE in two important cases: Accurate estimation of the order of a multivariable model and efficient identification of a model that satisfies integral controllability; both important for the design of robust model-based controllers. For both cases, we provide an overview of recent results that can be easily incorporated by the final user in related DOE. Computer simulations illustrate outcomes to be a... [more]

Aerobic granular sequencing batch reactors (SBRs) are usually inoculated with activated sludge which implies sometimes long start-up periods and high solids concentrations in the effluent due to the initial wash-out of the inoculum. In this work, the use of aerobic mature granules as inoculum in order to improve the start-up period was tested, but no clear differences were observed compared to a reactor inoculated with activated sludge. The effect of the aeration rate on both physical properties of granules and reactor performance was also studied in a stable aerobic granular SBR. The increase of the aeration flow rate caused the decrease of the average diameter of the granules. This fact enhanced the COD and ammonia consumption rates due to the increase of the DO level and the aerobic fraction of the biomass. However, it provoked a loss of the nitrogen removal efficiency due to the worsening of the denitrification capacity as a consequence of a higher aerobic fraction.

The deodorization of the refined palm oil process is simulated here using ASPEN HYSYS. In the absence of a library molecular distillation (MD) process in ASPEN HYSYS, first, a single flash vessel is considered to represent a falling film MD process which is simulated for a binary system taken from the literature and the model predictions are compared with the published work based on ASPEN PLUS and DISMOL. Second, the developed MD process is extended to simulate the deodorization process. Parameter estimation technique is used to estimate the Antoine’s parameters based on literature data to calculate the pure component vapor pressure. The model predictions are then validated against the patented results of refining edible oil rich in natural carotenes and vitamin E and simulation results were found to be in good agreement, within a ±2% error of the patented results. Third, Response Surface Methodology (RSM) is employed to develop non-linear second-order polynomial equations based model... [more]

Smart manufacturing (SM) is a term generally applied to the improvement in manufacturing operations through integration of systems, linking of physical and cyber capabilities, and taking advantage of information including leveraging the big data evolution. SM adoption has been occurring unevenly across industries, thus there is an opportunity to look to other industries to determine solution and roadmap paths for industries such as biochemistry or biology. The big data evolution affords an opportunity for managing significantly larger amounts of information and acting on it with analytics for improved diagnostics and prognostics. The analytics approaches can be defined in terms of dimensions to understand their requirements and capabilities, and to determine technology gaps. The semiconductor manufacturing industry has been taking advantage of the big data and analytics evolution by improving existing capabilities such as fault detection, and supporting new capabilities such as predict... [more]

Datasets with missing values arising from causes such as sensor failure, inconsistent sampling rates, and merging data from different systems are common in the process industry. Methods for handling missing data typically operate during data pre-processing, but can also occur during model building. This article considers missing data within the context of principal component analysis (PCA), which is a method originally developed for complete data that has widespread industrial application in multivariate statistical process control. Due to the prevalence of missing data and the success of PCA for handling complete data, several PCA algorithms that can act on incomplete data have been proposed. Here, algorithms for applying PCA to datasets with missing values are reviewed. A case study is presented to demonstrate the performance of the algorithms and suggestions are made with respect to choosing which algorithm is most appropriate for particular settings. An alternating algorithm based... [more]

Data analysis used for biomedical research, particularly analysis involving metabolic or signaling pathways, is often based upon univariate statistical analysis. One common approach is to compute means and standard deviations individually for each variable or to determine where each variable falls between upper and lower bounds. Additionally, p-values are often computed to determine if there are differences between data taken from two groups. However, these approaches ignore that the collected data are often correlated in some form, which may be due to these measurements describing quantities that are connected by biological networks. Multivariate analysis approaches are more appropriate in these scenarios, as they can detect differences in datasets that the traditional univariate approaches may miss. This work presents three case studies that involve data from clinical studies of autism spectrum disorder that illustrate the need for and demonstrate the potential impact of multivariate... [more]

Prilling is a common process in the fertilizer industry, where the fertilizer melt is converted to droplets that fall, cool down and solidify in a countercurrent flow of air in a prilling tower. A vibratory granulator was used to investigate liquid jet breakup into droplets. The breakup of liquid jets subjected to a forced perturbation was investigated in the Rayleigh regime, where a mechanical vibration was applied in order to achieve the production of monodispersed particles. Images of the jet trajectory, breakup, and the formed drops were captured using a high-speed camera. A mathematical model for the liquid outflow conditions based on a transient two-dimensional Navier⁻Stokes equation was developed and solved analytically, and the correlations between the process parameters of the vibrator and the jet pressure that characterize their disintegration mode were identified. The theoretical predications obtained from the correlations showed a good agreement with the experimental result... [more]

We provide a critical outlook of the evolution of Industrial Process Monitoring (IPM) since its introduction almost 100 years ago. Several evolution trends that have been structuring IPM developments over this extended period of time are briefly referred, with more focus on data-driven approaches. We also argue that, besides such trends, the research focus has also evolved. The initial period was centred on optimizing IPM detection performance. More recently, root cause analysis and diagnosis gained importance and a variety of approaches were proposed to expand IPM with this new and important monitoring dimension. We believe that, in the future, the emphasis will be to bring yet another dimension to IPM: prognosis. Some perspectives are put forward in this regard, including the strong interplay of the Process and Maintenance departments, hitherto managed as separated silos.

This paper presents a review of history matching and oil field development optimization techniques with a focus on optimization algorithms. History matching algorithms are reviewed as a precursor to production optimization algorithms. Techniques for history matching and production optimization are reviewed including global and local methods. Well placement, well control, and combined well placement-control optimization using both secondary and tertiary oil production techniques are considered. Secondary and tertiary recovery techniques are commonly referred to as waterflooding and enhanced oil recovery (EOR), respectively. Benchmark models for comparison of methods are summarized while other applications of methods are discussed throughout. No single optimization method is found to be universally superior. Key areas of future work are combining optimization methods and integrating multiple optimization processes. Current challenges and future research opportunities for improved model v... [more]

The availability and low cost of shale gas has boosted its use as fuel and as a raw material to produce value-added compounds. Benzene is one of the chemicals that can be obtained from methane, and represents one of the most important compounds in the petrochemical industry. It can be synthesized via direct methane aromatization (DMA) or via indirect aromatization (using oxidative coupling of methane). DMA is a direct-conversion process, while indirect aromatization involves several stages. In this work, an economic, energy-saving, and environmental assessment for the production of benzene from shale gas using DMA as a reaction path is presented. A sensitivity analysis was conducted to observe the effect of the operating conditions on the profitability of the process. The results show that production of benzene using shale gas as feedstock can be accomplished with a high return on investment.

Metabolic acclimation to photosynthesis-associated stresses was examined in the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1 using integrated computational and photobioreactor analyses. A genome-enabled metabolic model, complete with measured biomass composition, was analyzed using ecological resource allocation theory to predict and interpret metabolic acclimation to irradiance, O₂, and nutrient stresses. Reduced growth efficiency, shifts in photosystem utilization, changes in photorespiration strategies, and differing byproduct secretion patterns were predicted to occur along culturing stress gradients. These predictions were compared with photobioreactor physiological data and previously published transcriptomic data and found to be highly consistent with observations, providing a systems-based rationale for the culture phenotypes. The analysis also indicated that cyanobacterial stress acclimation strategies created niches for heterotrophic organisms and that heter... [more]

This Special Issue (SI) of Processes on water soluble polymers (WSP), and the associated Special Issue reprint, contain papers that deal with this extremely popular area of scientific investigation in polymer science and engineering, both in academic and industrial environments.[...]

We have developed a closed-loop, high-throughput system that applies electrical stimulation and optical recording to facilitate the rapid characterization of extracellular, stimulus-evoked neuronal activity. In our system, a microelectrode array delivers current pulses to a dissociated neuronal culture treated with a calcium-sensitive fluorescent dye; automated real-time image processing of high-speed digital video identifies the neuronal response; and an optimized search routine alters the applied stimulus to achieve a targeted response. Action potentials are detected by measuring the post-stimulus, calcium-sensitive fluorescence at the neuronal somata. The system controller performs directed searches within the strength⁻duration (SD) stimulus-parameter space to build probabilistic neuronal activation curves. This closed-loop system reduces the number of stimuli needed to estimate the activation curves when compared to the more commonly used open-loop approach. This reduction allows t... [more]