LAPSE:2026.0290
Published Article

LAPSE:2026.0290
Modelling & optimization of recombinant protein production in a microbial cultivation with tunable induction
June 12, 2026
Abstract
Recombinant protein production in Escherichia coli is a widely used system in industry for biopharmaceuticals, enzymes or other proteins. For protein expression, lactose poses as a more favorable and cost-effective induction agent over the common IPTG trigger. It imposes less stress on the cells and is fully metabolizable by the strain used. Therefore, lactose serves as an additional substrate source and adds a degree of freedom through tunable induction levels. To harness this opportunity, a physiological bioprocess model was created, describing the growth and production dynamics of this 2-feed system. Green fluorescent protein is expressed as a model protein in a fed-batch process using glucose as the main substrate and lactose as the digestible inducer. A suitable production kinetic is chosen by fitting a number of models to a collected dataset. The resulting model is used to highlight opportunities for improved process design and control of a 2-stage fed-batch process. It emphasizes the benefit of model-based methods to directly optimize for productivity over traditional design of experiment approaches.
Recombinant protein production in Escherichia coli is a widely used system in industry for biopharmaceuticals, enzymes or other proteins. For protein expression, lactose poses as a more favorable and cost-effective induction agent over the common IPTG trigger. It imposes less stress on the cells and is fully metabolizable by the strain used. Therefore, lactose serves as an additional substrate source and adds a degree of freedom through tunable induction levels. To harness this opportunity, a physiological bioprocess model was created, describing the growth and production dynamics of this 2-feed system. Green fluorescent protein is expressed as a model protein in a fed-batch process using glucose as the main substrate and lactose as the digestible inducer. A suitable production kinetic is chosen by fitting a number of models to a collected dataset. The resulting model is used to highlight opportunities for improved process design and control of a 2-stage fed-batch process. It emphasizes the benefit of model-based methods to directly optimize for productivity over traditional design of experiment approaches.
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Pably P, Putra IGEP, Seibold G, Huusom JK, Kager J. Modelling & optimization of recombinant protein production in a microbial cultivation with tunable induction. Systems and Control Transactions 5:714-720 (2026) https://doi.org/10.69997/sct.152708
Author Affiliations
Pably P: DTU, Chemical and Biochemical Engineering, Kgs. Lyngby, Denmark
Putra IGEP: DTU, Chemical and Biochemical Engineering, Kgs. Lyngby, Denmark
Seibold G: DTU, Bioengineering, Kgs. Lyngby, Denmark
Huusom JK: DTU, Chemical and Biochemical Engineering, Kgs. Lyngby, Denmark
Kager J: DTU, Chemical and Biochemical Engineering, Kgs. Lyngby, Denmark
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Putra IGEP: DTU, Chemical and Biochemical Engineering, Kgs. Lyngby, Denmark
Seibold G: DTU, Bioengineering, Kgs. Lyngby, Denmark
Huusom JK: DTU, Chemical and Biochemical Engineering, Kgs. Lyngby, Denmark
Kager J: DTU, Chemical and Biochemical Engineering, Kgs. Lyngby, Denmark
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Journal Name
Systems and Control Transactions
Volume
5
First Page
714
Last Page
720
Year
2026
Publication Date
2026-06-12
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Original Submission
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PII: 0714-0720-443-SCT-5-2026, Publication Type: Journal Article
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LAPSE:2026.0290
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https://doi.org/10.69997/sct.152708
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References Cited
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