LAPSE:2023.23474
Published Article

LAPSE:2023.23474
A Theoretical Model of Mitochondrial ATP Synthase Deficiencies. The Role of Mitochondrial Carriers
March 27, 2023
Abstract
The m.8993T>G mutation of the mitochondrial MT-ATP6 gene is associated with NARP syndrome (neuropathy, ataxia and retinitis pigmentosa). The equivalent point mutation introduced in yeast Saccharomyces cerevisiae mitochondrial DNA considerably reduced the activity of ATP synthase and of cytochrome-c-oxidase, preventing yeast growth on oxidative substrates. The overexpression of the mitochondrial oxodicarboxylate carrier (Odc1p) was able to rescue the growth on the oxidative substrate by increasing the substrate-level phosphorylation of ADP coupled to the conversion of α-ketoglutarate (AKG) into succinate with an increase in Complex IV activity. Previous studies showed that equivalent point mutations in ATP synthase behave similarly and can be rescued by Odc1p overexpression and/or the uncoupling of OXPHOS from ATP synthesis. In order to better understand the mechanism of the ATP synthase mutation bypass, we developed a core model of mitochondrial metabolism based on AKG as a respiratory substrate. We describe the different possible metabolite outputs and the ATP/O ratio values as a function of ATP synthase inhibition.
The m.8993T>G mutation of the mitochondrial MT-ATP6 gene is associated with NARP syndrome (neuropathy, ataxia and retinitis pigmentosa). The equivalent point mutation introduced in yeast Saccharomyces cerevisiae mitochondrial DNA considerably reduced the activity of ATP synthase and of cytochrome-c-oxidase, preventing yeast growth on oxidative substrates. The overexpression of the mitochondrial oxodicarboxylate carrier (Odc1p) was able to rescue the growth on the oxidative substrate by increasing the substrate-level phosphorylation of ADP coupled to the conversion of α-ketoglutarate (AKG) into succinate with an increase in Complex IV activity. Previous studies showed that equivalent point mutations in ATP synthase behave similarly and can be rescued by Odc1p overexpression and/or the uncoupling of OXPHOS from ATP synthesis. In order to better understand the mechanism of the ATP synthase mutation bypass, we developed a core model of mitochondrial metabolism based on AKG as a respiratory substrate. We describe the different possible metabolite outputs and the ATP/O ratio values as a function of ATP synthase inhibition.
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Keywords
ATP/O, metabolic model, mitochondrial metabolism, Odc1, substrate-level phosphorylation
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Suggested Citation
Mazat JP, Devin A, Yoboue E, Ransac S. A Theoretical Model of Mitochondrial ATP Synthase Deficiencies. The Role of Mitochondrial Carriers. (2023). LAPSE:2023.23474
Author Affiliations
Mazat JP: IBGC CNRS UMR 5095, 1 Rue Camille Saint-Saens, CEDEX, 33077 Bordeaux, France; Université de Bordeaux, 146 Rue Leo-Saignat, CEDEX, 33076 Bordeaux, France [ORCID]
Devin A: IBGC CNRS UMR 5095, 1 Rue Camille Saint-Saens, CEDEX, 33077 Bordeaux, France
Yoboue E: IBGC CNRS UMR 5095, 1 Rue Camille Saint-Saens, CEDEX, 33077 Bordeaux, France
Ransac S: IBGC CNRS UMR 5095, 1 Rue Camille Saint-Saens, CEDEX, 33077 Bordeaux, France; Université de Bordeaux, 146 Rue Leo-Saignat, CEDEX, 33076 Bordeaux, France
Devin A: IBGC CNRS UMR 5095, 1 Rue Camille Saint-Saens, CEDEX, 33077 Bordeaux, France
Yoboue E: IBGC CNRS UMR 5095, 1 Rue Camille Saint-Saens, CEDEX, 33077 Bordeaux, France
Ransac S: IBGC CNRS UMR 5095, 1 Rue Camille Saint-Saens, CEDEX, 33077 Bordeaux, France; Université de Bordeaux, 146 Rue Leo-Saignat, CEDEX, 33076 Bordeaux, France
Journal Name
Processes
Volume
9
Issue
8
First Page
1424
Year
2021
Publication Date
2021-08-17
ISSN
2227-9717
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Original Submission
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PII: pr9081424, Publication Type: Journal Article
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LAPSE:2023.23474
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https://doi.org/10.3390/pr9081424
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Mar 27, 2023
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