In this work, a Distributed Model Predictive Control (MPC) methodology with fuzzy negotiation among subsystems has been developed and applied to a simulated sewer network. The wastewater treatment plant (WWTP) receiving this wastewater has also been considered in the methodology by means of an additional objective for the problem. In order to decompose the system into interconnected local subsystems, sectorization techniques have been applied based on structural analysis. In addition, a dynamic setpoint generation method has been added to improve system performance. The results obtained with the proposed methodology are compared to those obtained with standard centralized and decentralized model predictive controllers.