LAPSE:2024.0976v1
Published Article
LAPSE:2024.0976v1
A Hybrid Feature-Selection Method Based on mRMR and Binary Differential Evolution for Gene Selection
Kun Yu, Wei Li, Weidong Xie, Linjie Wang
June 7, 2024
Abstract
The selection of critical features from microarray data as biomarkers holds significant importance in disease diagnosis and drug development. It is essential to reduce the number of biomarkers while maintaining their performance to effectively minimize subsequent validation costs. However, the processing of microarray data often encounters the challenge of the “curse of dimensionality”. Existing feature-selection methods face difficulties in effectively reducing feature dimensionality while ensuring classification accuracy, algorithm efficiency, and optimal search space exploration. This paper proposes a hybrid feature-selection algorithm based on an enhanced version of the Max Relevance and Min Redundancy (mRMR) method, coupled with differential evolution. The proposed method improves the quantization functions of mRMR to accommodate the continuous nature of microarray data attributes, utilizing them as the initial step in feature selection. Subsequently, an enhanced differential evolution algorithm is employed to further filter the features. Two adaptive mechanisms are introduced to enhance early search efficiency and late population diversity, thus reducing the number of features and balancing the algorithm’s exploration and exploitation. The results highlight the improved performance and efficiency of the hybrid algorithm in feature selection for microarray data analysis.
Keywords
biomarker, differential evolution, feature selection, microarray data
Suggested Citation
Yu K, Li W, Xie W, Wang L. A Hybrid Feature-Selection Method Based on mRMR and Binary Differential Evolution for Gene Selection. (2024). LAPSE:2024.0976v1
Author Affiliations
Yu K: College of Medicine and Bioinformation Engineering, Northeastern University, Hunnan District, Shenyang 110169, China
Li W: School of Computer Science and Engineering, Northeastern University, Hunnan District, Shenyang 110169, China; Key Laboratory of Intelligent Computing in Medical Image (MIIC), Hunnan District, Shenyang 110169, China
Xie W: School of Computer Science and Engineering, Northeastern University, Hunnan District, Shenyang 110169, China
Wang L: School of Computer Science and Engineering, Northeastern University, Hunnan District, Shenyang 110169, China
Journal Name
Processes
Volume
12
Issue
2
First Page
313
Year
2024
Publication Date
2024-02-01
ISSN
2227-9717
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Original Submission
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PII: pr12020313, Publication Type: Journal Article
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LAPSE:2024.0976v1
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https://doi.org/10.3390/pr12020313
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