LAPSE:2025.0534
Published Article

LAPSE:2025.0534
Modelling the in vitro FooD Digestion SIMulator FooDSIM
June 27, 2025
Abstract
Understanding the complexity of human digestion is critical for designing models that serve as valuable research tools for process simulation and prediction. Due to the high cost of medical intervention & recent advancements in in vitro digestion protocols, increased demand for inexpensive in silico solutions emerges. This study aims to develop a mathematical model that simulates the in vitro dynamic Food Digestion SIMulator (FooDSIM) functionalities via a digital twin approach. Ordinary Differential Equations (ODEs) simulate the system as a series of Continuously Stirred Tank Reactors (CSTRs) and describe different regions of human organs (stomach, duodenum, ileum, colon) of the human Gastrointestinal Tract (GIT). Various time horizons were used to investigate the effect of periodic feeding on the dynamic stabilisation of the inherently simulated processes (hydraulics, pH, biochemical interactions between enzymes & substrates, and nutrient absorption). A Polynomial Chaos Expansion (PCE)-based Global Sensitivity Analysis (GSA) was performed to explore causal relationships between input & output variables by performing uncertainty quantification. Results indicate that the system self-stabilizes only after 3-4 feeding cycles. Initially, enzyme concentration increases in the duodenum above the input feed threshold, thus significantly affecting the digestion kinetics in the subsequent reactors. Two cardinal models used for the fitting of enzymatic activity data with pH values indicate satisfactory Mean Squared Error (MSE) scores (<0.0114 for Model 1, <0.0134 for Model 2). Overall, this research highlights the potential of mathematical modeling for simulating digestion and predicting experiment outcomes.
Understanding the complexity of human digestion is critical for designing models that serve as valuable research tools for process simulation and prediction. Due to the high cost of medical intervention & recent advancements in in vitro digestion protocols, increased demand for inexpensive in silico solutions emerges. This study aims to develop a mathematical model that simulates the in vitro dynamic Food Digestion SIMulator (FooDSIM) functionalities via a digital twin approach. Ordinary Differential Equations (ODEs) simulate the system as a series of Continuously Stirred Tank Reactors (CSTRs) and describe different regions of human organs (stomach, duodenum, ileum, colon) of the human Gastrointestinal Tract (GIT). Various time horizons were used to investigate the effect of periodic feeding on the dynamic stabilisation of the inherently simulated processes (hydraulics, pH, biochemical interactions between enzymes & substrates, and nutrient absorption). A Polynomial Chaos Expansion (PCE)-based Global Sensitivity Analysis (GSA) was performed to explore causal relationships between input & output variables by performing uncertainty quantification. Results indicate that the system self-stabilizes only after 3-4 feeding cycles. Initially, enzyme concentration increases in the duodenum above the input feed threshold, thus significantly affecting the digestion kinetics in the subsequent reactors. Two cardinal models used for the fitting of enzymatic activity data with pH values indicate satisfactory Mean Squared Error (MSE) scores (<0.0114 for Model 1, <0.0134 for Model 2). Overall, this research highlights the potential of mathematical modeling for simulating digestion and predicting experiment outcomes.
Record ID
Keywords
Digestion Modeling, Digital Twin, Global Sensitivity Analysis, Parameter Estimation
Subject
Suggested Citation
Floros S, Bhonsale SS, Gaspari S, Akkermans S, Impe JFV. Modelling the in vitro FooD Digestion SIMulator FooDSIM. Systems and Control Transactions 4:2379-2384 (2025) https://doi.org/10.69997/sct.162389
Author Affiliations
Floros S: BioTeC+ Chemical & Biochemical Process Technology & Control, Department of Chemical Engineering, KU Leuven, Gent, Belgium
Bhonsale SS: BioTeC+ Chemical & Biochemical Process Technology & Control, Department of Chemical Engineering, KU Leuven, Gent, Belgium
Gaspari S: BioTeC+ Chemical & Biochemical Process Technology & Control, Department of Chemical Engineering, KU Leuven, Gent, Belgium
Akkermans S: BioTeC+ Chemical & Biochemical Process Technology & Control, Department of Chemical Engineering, KU Leuven, Gent, Belgium
Impe JFV: BioTeC+ Chemical & Biochemical Process Technology & Control, Department of Chemical Engineering, KU Leuven, Gent, Belgium
Bhonsale SS: BioTeC+ Chemical & Biochemical Process Technology & Control, Department of Chemical Engineering, KU Leuven, Gent, Belgium
Gaspari S: BioTeC+ Chemical & Biochemical Process Technology & Control, Department of Chemical Engineering, KU Leuven, Gent, Belgium
Akkermans S: BioTeC+ Chemical & Biochemical Process Technology & Control, Department of Chemical Engineering, KU Leuven, Gent, Belgium
Impe JFV: BioTeC+ Chemical & Biochemical Process Technology & Control, Department of Chemical Engineering, KU Leuven, Gent, Belgium
Journal Name
Systems and Control Transactions
Volume
4
First Page
2379
Last Page
2384
Year
2025
Publication Date
2025-07-01
Version Comments
Original Submission
Other Meta
PII: 2379-2384-1391-SCT-4-2025, Publication Type: Journal Article
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LAPSE:2025.0534
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https://doi.org/10.69997/sct.162389
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Jun 27, 2025
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References Cited
- Sensoy I. A review on the food digestion in the digestive tract and the used in vitro models. Curr Res Food Sci 4:308-319 (2021) https://doi.org/10.1016/j.crfs.2021.04.004
- Gouseti O, Bornhorst GM, Bakalis S, Mackie A, eds. Interdisciplinary approaches to food digestion. Cham: Springer Int Publ (2019) https://doi.org/10.1007/978-3-030-03901-1
- Gaspari S, Akkermans S, Van Impe J. Development of a dynamic in vitro food digestion simulator (FooDSIM): A deterministic model system for human digestion. In FOODSIM'2024:166-168 (2024) EUROSIS
- Baka M, Van Derlinden E, Boons K, Mertens L, Van Impe JF. Impact of pH on the cardinal temperatures of E. coli K12: Evaluation of the gamma hypothesis. Food Control 29:328-335 (2013) https://doi.org/10.1016/j.foodcont.2012.04.022
- Marelli S, Lamas C, Konakli K, Mylonas C, Wiederkehr P, Sudret B. UQLab user manual - Sensitivity analysis. Report UQLab-V2.1-106, Chair of Risk, Safety and Uncertainty Quantification, ETH Zurich, Switzerland (2024)
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