The growing size and complexity of energy system optimization models, driven by high-resolution spatial data, pose significant computational challenges. This study introduces methods to reduce model’s size and improve computational efficiency while preserving solution accuracy. First, a composite-curve-based approach is proposed to aggregate granular data into larger resolutions without averaging out specific properties. Second, a general clustering method groups geographically proximate fields, replacing multiple transportation arcs with a single arc to reduce transportation-related variables. Lastly, a two-step algorithm that decomposes the sup-ply chain design problems into two smaller, more manageable subproblems is introduced. These methods are applied to a case study of switchgrass-to-biofuels network design in eight U.S. Midwest states, demonstrating their effectiveness with realistic and detailed spatial data.